Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015951671.1_cds_XP_016491627.1_81922
CDS Infomation

[gene=LOC107811253] [db_xref=GeneID:107811253] [protein=pentatricopeptide repeat-containing protein At1g62260, mitochondrial-like] [protein_id=XP_016491627.1] [location=complement(join(7765..8809,8854..9803))] [gbkey=CDS]
Sequence

ATGGCAATTTGGTGCCGGAATATAAGCAGCTTAAGGAGGTCTGCAATAAACAGGCAGCTA
AGCCATCTCATTGCACCATATGTTTCTGGTCAACCAATACGTTGTCGTTCGACCAAGATT
TCTGATGCTCCTCCAGACATACGTAGAGTGAACAAGAACATCACGAACTTAATTCGAAAT
GGTCGAGTAGAGGATGCCAGAAGATTATTCGGTATGTTAACGCATCGAAATACGGTTACG
TGGAACTCAATGATTAGTGGGTACGTGCAACAACGTGAGATTGTAAAAGCAAGATACCTG
TTCGATAAAATGCCGCAGAGAGATGTTGTCTCCTGGAATGTAATGATTTCTGGTTATCTG
TCCTGTCGACATTTGGAGGAAGGTAGAAAATTGTTCGATGAAATGCCTAGCAGAGACTTC
GTTTCCTGGAACACGATGATTAGTGGGTATGCTAAAGCTGGAAAAATGAATGAAGCACTG
AAGCTTTTTAACTGTATGCCTGATAAGAATGTCGTGTCCTGGAATGCTGTTATTTCTGGA
TTTTTGCGTAACGGGGATGTGAAAACTGCTGTAGAATATTTCAAGAGAATGCCGGAGAGG
GATTCAGCTTCTCTTGGTGCACTTGTATCGGGTTTGATCCAGAATGAGGAATTGGATGAG
GCTGAAAATGTTCTTTATGAATTTGGAGAAAGCAATGATGGGACAGAAGATTTGATTCAT
GCTTATAACACTTTGATTGCTGGATATGGTCAGAAAGGAAGGGCTGGTGATGCTAGACGC
CTTTTTGATAAAGTTCCTTCTTATAGTAGTGCTCAAGGAATTAGCAGAAAGAAGAGATTT
GAGAGAAATGTGGTATCATGGAATTCCATGATCATGGCTTATATCAAAGCCGGAGATATG
GTTTCTTCAAGAGAGCTTTTTGATCAGATGACNCTTATATCAAAGCCGGAGGATACATTT
TCATGGAACACAATGGTTAGTGGCTATGTTCATGCCTCAAATATGGATGAAGCATCAAAC
CTGTTCTCTAAAATGCGAAATCCTGATGTACTATCATGGAATTCAATAATCTCTGGATAT
GCACAGACGGGGAAGTTGGAATTGGCCCGTGATTATTTTGAAAGGATGCCCCAGAAGAAT
CGGGTTTCTTGGAATTCCATGATCTCTGGGTGTGAAAGAAATGCAGACTATAAAGGAGCA
ATAAAGCTTTTCATGGAGATGCAACAGGCAGGAGAGAAACCTGATAGGCACACACTCTCC
TCACTTCTAAGTGTTTGTGCTGAAACTGTGGCTTTGTTTCTGGGTATGCAGATTCATCAG
TTAGTGTCAAAGACTGTTATACCAGATATACCTTTAAACAATTCCTTAATAACTATGTAC
GCAAGATGTGGTGCAATACATGAAGCAAGGACAATTTTTGATAATATGAAATTTCAAAAA
GACGTAATCTCATGGAATGCAATGGTCGGAGGATACGCATCTCATGGTTTTGCATTTGAA
GCCCTAGAGCTTTTTGAATTAATGAAGTGCCTTAAAGTGAGGCCAACTCGCATCACGTTC
ATTTCAGTTCTGAATGCGTGTGCTCATGCTGGTTTAGTGGAACAAGGTCGGTTATATTTT
AAATCAATGGACTCTGAATTTGGCATTAAACCTGAGGTTGAGCATTTTGCCTCCCTTGTA
GATATTGTTAGCCGCGACGGACAGCTTGAGGAGGCCATGAAAGTGATTAACACTATGCCA
GTGGAGCCAGATAAGGCTGTCTGGGGTGCAGTATTAGGTGCTTGTAGGGTGCACAACAAT
GTTGAGTTTGCGCGAATAGCAGCTGAAGCGCTAATGCGCCTGGAACCGGAGAGTTCAGGC
CCTTATTGTTTGCTATATAACATGTATGCCGATGCTGGAAGGTGGGATGATGCGAACGGA
ATCAGAGTGTTGATGGAAACGAATAATATAAGGAAGGAACCCGCTTATAGCAGGATGGGC
TCAGCTTCCTCATAG

Peptide Sequence

PEP ID

XP_016491627.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g62260, mitochondrial-like [Nicotiana tabacum]
Sequence

MAIWCRNISSLRRSAINRQLSHLIAPYVSGQPIRCRSTKISDAPPDIRRVNKNITNLIRN
GRVEDARRLFGMLTHRNTVTWNSMISGYVQQREIVKARYLFDKMPQRDVVSWNVMISGYL
SCRHLEEGRKLFDEMPSRDFVSWNTMISGYAKAGKMNEALKLFNCMPDKNVVSWNAVISG
FLRNGDVKTAVEYFKRMPERDSASLGALVSGLIQNEELDEAENVLYEFGESNDGTEDLIH
AYNTLIAGYGQKGRAGDARRLFDKVPSYSSAQGISRKKRFERNVVSWNSMIMAYIKAGDM
VSSRELFDQMTLISKPEDTFSWNTMVSGYVHASNMDEASNLFSKMRNPDVLSWNSIISGY
AQTGKLELARDYFERMPQKNRVSWNSMISGCERNADYKGAIKLFMEMQQAGEKPDRHTLS
SLLSVCAETVALFLGMQIHQLVSKTVIPDIPLNNSLITMYARCGAIHEARTIFDNMKFQK
DVISWNAMVGGYASHGFAFEALELFELMKCLKVRPTRITFISVLNACAHAGLVEQGRLYF
KSMDSEFGIKPEVEHFASLVDIVSRDGQLEEAMKVINTMPVEPDKAVWGAVLGACRVHNN
VEFARIAAEALMRLEPESSGPYCLLYNMYADAGRWDDANGIRVLMETNNIRKEPAYSRMG
SASS

Transcript Sequence

Gene sequence data has not been registered.